Hall of Fame: User contributed flowcharts¶
Please contribute your own work flows in your favourite colours with (an optional) short description to email: ruffus_lib at llew.org.uk
RNASeq pipeline¶
http://en.wikipedia.org/wiki/RNA-Seq
Mapping transcripts onto genomes using high-throughput sequencing technologies (svg).
non-coding evolutionary constraints¶
http://en.wikipedia.org/wiki/Noncoding_DNA
Non-protein coding evolutionary constraints in different species (svg).
SNP annotation¶
Predicting impact of different Single Nucleotide Polymorphisms
http://en.wikipedia.org/wiki/Single-nucleotide_polymorphism
Population variation across genomes (svg).
Using “pseudo” targets to run only part of the pipeline (svg).
Chip-Seq analysis¶
Analysing DNA binding sites with Chip-Seq http://en.wikipedia.org/wiki/Chip-Sequencing
(svg)